Ecosyste.ms: Timeline

Browse the timeline of events for every public repo on GitHub. Data updated hourly from GH Archive.

pgarrison

pgarrison created a comment on a pull request on AllenInstitute/biofile-finder
@BrianWhitneyAI To-do: review and merge!

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pgarrison created a comment on an issue on AllenInstitute/biofile-finder
This would look like adding a bunch of conditionals to the code from #370, #376, and #377. ```python if (file has a "Should Be In Local" annotation) { do the new behavior } else { do...

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pgarrison created a comment on a pull request on AllenInstitute/biofile-finder
This PR is ready to merge once #370 is merged

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pgarrison created a comment on a pull request on AllenInstitute/biofile-finder
Lyndsay left the following comment. > @pgarrison Classic;) IDK, I slightly lean toward calling it local storage too. Whatever you think...but last thing is VAST is an acronym so I think you should...

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pgarrison created a comment on an issue on AllenInstitute/biofile-finder
Here's where I picked the example file: ![Screenshot 2024-12-20 at 10 50 35 AM](https://github.com/user-attachments/assets/fa9f1505-f92d-47a2-b926-7edbeac5c35c)

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pgarrison pushed 1 commit to feature/376-download-via-local-network AllenInstitute/biofile-finder
  • 376 Test for download path f706be0

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pgarrison opened an issue on AllenInstitute/biofile-finder
Download button for FMS data source on web BFF does not download
# Steps to reproduce * Connect to AICS VPN * Navigate to https://bff.allencell.org/ * Click "Get Started" * Click any file * In the file details pane on the right, click Download * Actual beh...
pgarrison opened an issue on AllenInstitute/biofile-finder
Cloud-first FMS branch should be backwards compatible
As currently designed, the cloud-first FMS features will cause breakages if used with the pre-cloud-first FMS ETL pipeline. But the cloud-first FMS ETL pipeline changes will cause breakages if used...
pgarrison created a branch on AllenInstitute/biofile-finder

feature/376-download-via-local-network - An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

pgarrison created a review comment on a pull request on AllenInstitute/biofile-finder
Resolved in [3cab1ac](https://github.com/AllenInstitute/biofile-finder/pull/370/commits/3cab1ac89cb76cfdda64731da3c211084f378422)

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pgarrison created a review on a pull request on AllenInstitute/biofile-finder

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pgarrison created a review comment on a pull request on AllenInstitute/biofile-finder
Added this elaboration in [29423b0](https://github.com/AllenInstitute/biofile-finder/pull/370/commits/29423b0518569239c52c6c0b912f6fb661616d01)

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pgarrison created a review on a pull request on AllenInstitute/biofile-finder

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pgarrison pushed 1 commit to feature/368-use-local-file-path-annotation AllenInstitute/biofile-finder
  • 368 Clearer comment about loading localPath 29423b0

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pgarrison created a review comment on a pull request on AllenInstitute/biofile-finder
Local path must exist because there is an annotation with the name Local File Path (line 81): if a file is not present on the Vast, there is no Local File Path annotation.

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pgarrison created a review on a pull request on AllenInstitute/biofile-finder

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pgarrison created a review comment on a pull request on AllenInstitute/biofile-finder
Resolved in [66f572c](https://github.com/AllenInstitute/biofile-finder/pull/375/commits/66f572c2f0f8bc49b926c514dc270a587bc3f334)

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pgarrison created a review on a pull request on AllenInstitute/biofile-finder

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pgarrison created a review comment on a pull request on AllenInstitute/biofile-finder
Resolved in [8817332](https://github.com/AllenInstitute/biofile-finder/pull/375/commits/88173323832b26611f456ca2a1aaf2638264255f)

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pgarrison created a review on a pull request on AllenInstitute/biofile-finder

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pgarrison pushed 2 commits to feature/367-canonical-path-is-cloud AllenInstitute/biofile-finder
  • 367 Hoist AICS_FMS_S3_URL_PREFIX to top-level constant 66f572c
  • 367 More detailed file_path comment 8817332

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pgarrison created a comment on a pull request on AllenInstitute/biofile-finder
> @pgarrison If we are specifically calling out VAST in the "Copy files to local NAS (VAST)" modal @BrianWhitneyAI was working on, perhaps we should be consistent and mention VAST here? Without pot...

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pgarrison opened a pull request on AllenInstitute/biofile-finder
367 Remove Canonical path and format Cloud path
# Purpose With the new cloud-first FMS backend features, the `file_path` from FMS is a cloud path like `staging.files.allencell.org/c18/726/e93/ea3/804/468/34d/873/d6c/435/c6/aicsfiles-test-8c85cf...
pgarrison created a comment on a pull request on AllenInstitute/biofile-finder
> Yeah I'm still unsure about "NAS" and if users will know what that is but Vast is now alot clearer. I think leaving out "local NAS" entirely makes sense. I don't think our users really know wh...

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pgarrison pushed 1 commit to feature/368-use-local-file-path-annotation AllenInstitute/biofile-finder
  • File Path (Vast) instead of File Path (Local) da16e23

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pgarrison pushed 2 commits to feature/368-use-local-file-path-annotation AllenInstitute/biofile-finder
  • 368 Test expects specific annotation from LabKey (not top-level annotation) 022377f
  • 368 Test for new HTTPAnnotationService special case 083456f

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pgarrison pushed 2 commits to feature/368-use-local-file-path-annotation AllenInstitute/biofile-finder
  • 368 Remove File Path (Local) top-level annotation to avoid duplication 1c54d47
  • 368 Rename annotation at the HTTPAnnotationService level 1126cd9

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pgarrison created a comment on an issue on AllenInstitute/biofile-finder
Some complications to the implementation: * No existing pattern for "promoting" an annotation from a "regular" annotation to a "top level" annotation. Top level annotations appear before the other...

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