Ecosyste.ms: Timeline
Browse the timeline of events for every public repo on GitHub. Data updated hourly from GH Archive.
mslarae13 created a comment on an issue on microbiomedata/submission-schema
I think I found another valid metadata entry that was made invalid by an unexpected or tested regex being added. Why are these values invalid? Make a new issue to resolve this one, depending on th...
mslarae13 created a comment on an issue on microbiomedata/issues
low priority, definitely not until the external data squad is complete and PK has completed the UI change.
mslarae13 opened an issue on microbiomedata/issues
Set submission portal to NOT auto select soil
We heard in some user research "I see soil is already selected, I don't know why? Maybe I did something at the beginning?" I can't recall why soil is auto selected but I'd like to also use this ...
mslarae13 created a comment on an issue on microbiomedata/issues
https://github.com/microbiomedata/issues/issues/720
mslarae13 created a comment on an issue on microbiomedata/issues
I don't think the status of this submission is actually changed o nthe submission portal because I don't officially have edit access
mslarae13 created a comment on a pull request on microbiomedata/metadata-for-user-facility-template-transformations
Cristina demo'd this for me and the changes sound good to me
mslarae13 created a comment on an issue on microbiomedata/submission-schema
https://github.com/microbiomedata/submission-schema/commit/4954e081bb56aaa2569f7476670ef2266cab7ac6#r150711705
mslarae13 commented on a commit on microbiomedata/submission-schema
@turbomam when and why was this regex added? I can't find the PR, and this regex has made valid DNA sample names invalid. The change of validation and regular expressions on the submission schem...
mslarae13 created a comment on an issue on microbiomedata/submission-schema
I have a submitted pending review submission with the "." in the names. Which means something happened / was changed to make these no longer valid. I don't know what keeps happening to validation...
mslarae13 opened an issue on microbiomedata/submission-schema
DNA sample name does allow "." in names, but it should
_I am not sure if this should be in schema or submission-schema_ The slot "DNA sample name" won't validate for a submission, I think, because there's "." in the sample name. According to the JG...
mslarae13 created a comment on an issue on microbiomedata/issues
@emileyfadrosh I sent you the draft email on 12/16. Can you send it to the PI when the holiday ends?
mslarae13 opened an issue on microbiomedata/issues
Potential GOLD Projects
The following projects have been identified as options to pull data into NMDC. The PIs have been contacted. Monitor submissions for responses from the PIs - [ ] Gs0131983: https://github.com/micro...
mslarae13 created a comment on an issue on microbiomedata/issues
Submitter sent a headshot. Can someone remind me where I should put it? Was it a googledrive folder? I can't remember... @aclum @pkalita-lbl @lamccue Otherwise, I think everything looks good. Dat...
mslarae13 created a comment on an issue on microbiomedata/issues
looks good except for env local and medium. Need to discuss with Chris
mslarae13 opened an issue on microbiomedata/issues
NMDC Submission: adc54fc8-2c94-457d-9b5c-89d7f005fb59
(did not auto generate) Submitter: Marina Nieto-Caballero, 0000-0002-7755-2490 Submission ID: adc54fc8-2c94-457d-9b5c-89d7f005fb59 Has data been generated: Yes PI name: Marina Nieto-Caballero PI ...
mslarae13 created a comment on an issue on microbiomedata/issues
@aclum I just cc'd you on an email. They put the alternate identifier for the biosample in "source material ID" . There's no where else to put this in the submission portal. So I'm leaving it for n...
mslarae13 created a comment on an issue on microbiomedata/issues
I emailed the submitter before this was submitted These are all metagenomics from different soils. They did do amplicon, and might add that in the future.
mslarae13 created a comment on an issue on microbiomedata/issues
One small change, moving the crop from other into the correct column. everything else looks good They put an NCBI ID in the source material column. this is probably wrong? Is it really metagenomics...
mslarae13 created a comment on an issue on microbiomedata/issues
This is the same submission that was already submitted. Jeff made some updates & re-submitted. Need to determine what is the best path to getting the new information added to the data portal
mslarae13 created a comment on an issue on microbiomedata/issues
Updates were made, https://github.com/microbiomedata/issues/issues/921
mslarae13 created a comment on an issue on microbiomedata/issues
From a workshop, not a real submission
mslarae13 closed an issue on microbiomedata/issues
NMDC Submission: 356ecf67-6b55-4375-9759-081e5fb9ddcd
Issue created from host: https://data.microbiomedata.org/ Submitter: Estelle Couradeau, 0000-0002-3947-2529 Submission ID: 356ecf67-6b55-4375-9759-081e5fb9ddcd Has data been generated: No P...
mslarae13 created a comment on an issue on microbiomedata/issues
soil metadata looks good, just need to format the EMSL sheet
mslarae13 created a comment on an issue on microbiomedata/issues
Next steps - Need study description - PI photo - need host_taxid - need host common name - need plant structure
mslarae13 opened an issue on microbiomedata/issues
weird amount of space between extensions in the check list
I'm not sure why there's so much space between each extension now, but can we shrink that space? 
mslarae13 closed an issue on microbiomedata/nmdc-schema
Expand NMDC to support GLBRC
In working with Adina, it's been identified that there are some data as metadata slots that should be added to the NMDC schema to support this project. Some of the slots below are already in NM...
mslarae13 closed an issue on microbiomedata/issues
Milestone - Deploy a QC dashboard with user input (3.4)
Due in FY25 Q1, in order to accomplish this work should start in FY24 Q4.