Ecosyste.ms: Timeline

Browse the timeline of events for every public repo on GitHub. Data updated hourly from GH Archive.

Unaimend

Unaimend pushed 25 commits to master Porthmeus/MeMoMe
  • Add gapsec annotation. Change VMH annotation. 7ab599e
  • Fix gapseq name. d3a1c1e
  • merged daf/misc onto this branch in order to include the newer databases as well in this branch 5384fee
  • added source variables for names, inchi_string and annoations in the MeMoMetabolite, still misses tests and changes i... 75e745a
  • removing some annotation files to merge master to this branch c51d512
  • implemented a correct merge of MeMoMetabolites with the source attribute 0e8e2d5
  • added the source feature to the annotation functions of ChEBI, VMH and BiGG 630840e
  • added the source feature for modelseed 4742efd
  • Propagated the source argument for the adder and setter function in MeMoMetabolite Fixed some bugs in the initial imp... b8a2fcc
  • validate inchis before they are set/added to the metabolites list, if not valid, will be set to None. Corrected some ... 15e8be9
  • some bugfixes to get the correct validation of Inchi strings aa90f0c
  • added some more comments, so that it gets clearer to what I do 3c50e08
  • changed type specifications for dict in MeMoMetabolite 777c786
  • removed gapseq annotation scripts ff42464
  • more type definitions for the arguments in functions 9845417
  • Merge branch 'master' into jan/issue159 1cd2f4f
  • Update main.yml d5b4479
  • Update main.yml b9e6407
  • Update main.yml c048105
  • Update main.yml 47a98e1
  • and 5 more ...

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Unaimend created a review comment on a pull request on Porthmeus/MeMoMe
Not applicable anymore. I hope it's fixed

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Unaimend created a review on a pull request on Porthmeus/MeMoMe

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Unaimend created a review comment on a pull request on Porthmeus/MeMoMe
Done

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Unaimend created a review on a pull request on Porthmeus/MeMoMe

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Unaimend created a comment on a pull request on Porthmeus/MeMoMe
The merging step On Wed, 29 Jan 2025, 18:33 SteFlor, ***@***.***> wrote: > Could you also add this step to the main function please > > Done in a commit > > — > Reply to this email direc...

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Unaimend starred folke/flash.nvim
Unaimend starred echasnovski/mini.surround
Unaimend pushed 1 commit to thomas/dev Unaimend/algebraic_automata_theory
  • Generate admissible partitions 79abc8b

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Unaimend pushed 2 commits to thomas/dev Unaimend/algebraic_automata_theory

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Unaimend pushed 1 commit to thomas/dev/reformat_dbs Porthmeus/MeMoMe

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Unaimend created a comment on an issue on Porthmeus/MeMoMe
Yeah. Definitely On Fri, 17 Jan 2025, 15:19 Jan Taubenheim, ***@***.***> wrote: > These databases are just shit... why would you change the ids? Maybe we > make it convention that all names ...

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Unaimend created a comment on an issue on Porthmeus/MeMoMe
It think to convrt hmdb you need like 20gig of ram

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Unaimend created a comment on an issue on Porthmeus/MeMoMe
It depends on the db and its definitly not fast On Fri, 17 Jan 2025, 15:16 Thomas, ***@***.***> wrote: > Yes > > On Fri, 17 Jan 2025, 15:15 Jan Taubenheim, ***@***.***> > wrote: > >> I d...

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Unaimend created a comment on an issue on Porthmeus/MeMoMe
Yes On Fri, 17 Jan 2025, 15:15 Jan Taubenheim, ***@***.***> wrote: > I don't like the idea to host a server for the databases. I think we > should refactor during runtime. This is a one-time...

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Unaimend created a comment on a pull request on Porthmeus/MeMoMe
Could you also add this step to the main function please

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