Ecosyste.ms: Timeline

Browse the timeline of events for every public repo on GitHub. Data updated hourly from GH Archive.

JoseBlanca

JoseBlanca pushed 1 commit to main JoseBlanca/ncbi_utils

February 7, 2025 9:10am

download experiment data 500236f

JoseBlanca pushed 1 commit to main JoseBlanca/ncbi_utils

February 7, 2025 7:43am

add more informative errors 3bd7fa3

JoseBlanca pushed 1 commit to main JoseBlanca/ncbi_utils

February 6, 2025 11:09am

implement getting bioproject acc and id 936c555

JoseBlanca pushed 1 commit to main JoseBlanca/ncbi_utils

February 6, 2025 10:32am

new sra query implementation 6fd8b1c

JoseBlanca pushed 1 commit to main JoseBlanca/ncbi_utils

February 5, 2025 9:37am

implement sra info fetching 51869d4

JoseBlanca created a branch on JoseBlanca/ncbi_utils

February 5, 2025 9:22am

JoseBlanca created a repository: JoseBlanca/ncbi_utils

February 5, 2025 9:22am

https://github.com/JoseBlanca/ncbi_utils

JoseBlanca pushed 1 commit to main bioinfcomav/snp_pipeline

February 4, 2025 9:35am

implement genomic pipeline 626ae3a

JoseBlanca pushed 1 commit to main bioinfcomav/bioinfcomav.github.io

February 3, 2025 9:38am

update courses page e506115

JoseBlanca pushed 1 commit to main bioinfcomav/bioinfcomav.github.io

February 3, 2025 7:57am

update links to course materials 0e882fa

JoseBlanca pushed 1 commit to main bioinfcomav/snp_pipeline

January 31, 2025 10:47am

add read group info to bam 2fd9cc0

JoseBlanca pushed 1 commit to main bioinfcomav/snp_pipeline

January 31, 2025 9:25am

add option to trim bases from front and tail 97ec5b3

JoseBlanca pushed 1 commit to main bioinfcomav/snp_pipeline

January 31, 2025 9:12am

add trim_quals to pipeline 10f6432

JoseBlanca pushed 1 commit to main bioinfcomav/snp_pipeline

January 31, 2025 8:56am

add calmd to pipeline 05d5927

JoseBlanca pushed 1 commit to main bioinfcomav/snp_pipeline

January 31, 2025 8:27am

add to map stats % reads above mapq 3b75450

JoseBlanca pushed 1 commit to main bioinfcomav/snp_pipeline

January 31, 2025 8:18am

plot coverage distributions 6f754d0

JoseBlanca pushed 1 commit to main JoseBlanca/trim_quals

January 30, 2025 11:20am

improve command line interface 992e796

JoseBlanca pushed 1 commit to main JoseBlanca/trim_quals

January 30, 2025 10:47am

add tests and fix bugs 81fd956

JoseBlanca pushed 1 commit to main JoseBlanca/trim_quals

January 30, 2025 9:54am

rename functions 1b0fb53

JoseBlanca pushed 1 commit to main JoseBlanca/trim_quals_py

January 30, 2025 9:51am

fix typo and add error check 92b58c0

JoseBlanca created a branch on JoseBlanca/trim_quals_py

January 30, 2025 8:00am

JoseBlanca created a repository: JoseBlanca/trim_quals_py

January 30, 2025 8:00am

https://github.com/JoseBlanca/trim_quals_py

JoseBlanca pushed 1 commit to main JoseBlanca/trim_quals

January 28, 2025 2:42pm

move parameters to main 5b86b80

JoseBlanca pushed 1 commit to main JoseBlanca/trim_quals

January 28, 2025 2:36pm

set the trimmed qualities c0fbe74

JoseBlanca pushed 1 commit to main JoseBlanca/trim_quals

January 28, 2025 11:09am

fix usage, input and output are required ddfc21b

JoseBlanca pushed 1 commit to main JoseBlanca/trim_quals

January 28, 2025 8:46am

Read and write both form files, stdin and stdout 4d46105

JoseBlanca pushed 1 commit to main JoseBlanca/trim_quals

January 28, 2025 8:38am

It output format matches the input format f0755c8

JoseBlanca created a branch on JoseBlanca/trim_quals

January 28, 2025 7:40am

JoseBlanca created a repository: JoseBlanca/trim_quals

January 28, 2025 7:40am

https://github.com/JoseBlanca/trim_quals

JoseBlanca pushed 1 commit to main bioinfcomav/snp_pipeline

January 27, 2025 11:29am

add option to not deduplicate and re run cb1a898

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