Ecosyste.ms: Timeline
Browse the timeline of events for every public repo on GitHub. Data updated hourly from GH Archive.
pkalita-lbl closed a pull request on geneontology/gocam-py
Fix broken PMID links in CX2 output
Fixes #44 The proximate cause of the issue (`PMID`s not being expanded into URLs correctly) was that the local project I use to do the CX2 conversion and upload to NDEx was using `prefixmaps` v...
pkalita-lbl opened a pull request on geneontology/gocam-py
Do not link to ECO terms
Fixes #44 The proximate cause of the issue (`PMID`s not being expanded into URLs correctly) was that the local project I use to do the CX2 conversion and upload to NDEx was using `prefixmaps` v...
pkalita-lbl pushed 1 commit to issue-44-evidence-links geneontology/gocam-py
- Enforce a minimum of prefixmaps 0.2.6 in order to properly expand PMIDs 809e9de
pkalita-lbl created a branch on geneontology/gocam-py
issue-44-evidence-links - Draft data model for GO-CAMs
pkalita-lbl opened an issue on geneontology/gocam-py
PubMed links not rendering correctly in CX2
See for example: https://www.ndexbio.org/viewer/networks/6fc0aa1d-b8c5-11ef-99aa-005056ae3c32 Click on a node, note that the PMIDs are all pointing to `https://www.ndexbio.org/viewer/networks/None...
pkalita-lbl pushed 4 commits to issue-1383-metadata-suggestion-ui microbiomedata/nmdc-server
pkalita-lbl pushed 1 commit to 289-update-water-extensions-enumerations-and-plantassociated-ones-that-are-ready-then-build-and-release microbiomedata/submission-schema
- Regenerate lock file without upgrades 454fca4
pkalita-lbl pushed 1 commit to issue-1383-metadata-suggestion-ui microbiomedata/nmdc-server
- Make suggestion requests on data change; show results in new MetadataSuggester component 63dc2d4
pkalita-lbl opened a pull request on microbiomedata/nmdc-field-notes
Add additional certificate fingerprint
The Google Play Console was complaining that it could not verify domain ownership for deep linking. Its suggested fix was to add this additional certificate fingerprint to our `assetlinks.json` fil...
pkalita-lbl created a branch on microbiomedata/nmdc-field-notes
fix-additional-cert-fingerprint - Mobile app for metadata collection on the go
pkalita-lbl created a comment on an issue on microbiomedata/nmdc-field-notes
I uploaded `Image 2.png` from the `Feature Graphic` directory in Google Drive to the Google Play Console, and it seems to be happy with that image. Thanks @kaelanprime! Closing.
pkalita-lbl closed an issue on microbiomedata/nmdc-field-notes
Create a feature graphic for Play Store listing
The Google Play Store listing needs a [feature graphic](https://support.google.com/googleplay/android-developer/answer/9866151#zippy=%2Cfeature-graphic). The docs have a number of suggestions, but ...
pkalita-lbl closed an issue on linkml/linkml
Convert tests in `tests/test_validation` to pytest
* Ensure all tests are written in `pytest` style (top-level test functions instead of `unittest.TestCase` subclasses, plain `assert` statements) * Ensure tests only write to temporary files, if ne...
pkalita-lbl pushed 3 commits to main linkml/linkml
pkalita-lbl deleted a branch microbiomedata/nmdc-server
1518-update-to-nmdc-schema-version-1130-and-submission-schema-version-1130
pkalita-lbl closed an issue on microbiomedata/nmdc-server
Update to `nmdc-schema` version `11.3.0` and `submission-schema` version `11.3.0`
#### Tasks - [x] Update `nmdc-schema` version to `11.3.0` ([released](https://github.com/microbiomedata/nmdc-schema/releases/tag/v11.3.0) on January 17, 2025) - [ ] Update `submission-schema` vers...
pkalita-lbl pushed 6 commits to main microbiomedata/nmdc-server
- Bump `nmdc-schema` to `11.3.0` and `submission-schema` to `11.3.0rc1` Note: `submission-schema` version `11.3.0` has... a8f169f
- Synchronize `web/yarn.lock` file with `web/package.json` changes eaaa808
- Reference `submission-schema` via Git commit hash (since not released) Reference: https://python-poetry.org/docs/dep... b6e1bef
- Use correct Git commit hash (oops) b91bbdf
- Upgrade to nmdc-submission-schema 11.3.0 4ca1712
- Merge pull request #1519 from microbiomedata/1518-update-to-nmdc-schema-version-1130-and-submission-schema-version-11... c744885
pkalita-lbl pushed 1 commit to 1518-update-to-nmdc-schema-version-1130-and-submission-schema-version-1130 microbiomedata/nmdc-server
- Upgrade to nmdc-submission-schema 11.3.0 4ca1712
pkalita-lbl published a release on microbiomedata/submission-schema
v11.3.0
## What's Changed * post-voting env triad value set serialization by @turbomam in https://github.com/microbiomedata/submission-schema/pull/280 * Notebooks for `Water` environmental context value...
pkalita-lbl deleted a branch microbiomedata/submission-schema
291-update-submission-schema-to-use-nmdc-schema-version-1130
pkalita-lbl pushed 2 commits to main microbiomedata/submission-schema
pkalita-lbl closed an issue on microbiomedata/submission-schema
Update submission schema to use `nmdc-schema` version `11.3.0`
`nmdc-schema` version `11.3.0` was released on January 17, 2025. Release notes: https://github.com/microbiomedata/nmdc-schema/releases/tag/v11.3.0
pkalita-lbl closed a pull request on microbiomedata/submission-schema
Bump `nmdc-schema` version from `11.3.0rc1` to `11.3.0`
On this branch, I updated the `nmdc-schema` version from `11.3.0rc1` to `11.3.0`. This branch contains the changes I made by following the "[Updating the submission schema](https://github.com/micro...