Ecosyste.ms: Timeline

Browse the timeline of events for every public repo on GitHub. Data updated hourly from GH Archive.

meganrm

meganrm created a review on a pull request on allen-cell-animated/cell-catalog

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meganrm created a review comment on a pull request on allen-cell-animated/cell-catalog
can you make a pr to that branch so I can see the script you wrote to generate these files?

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meganrm created a review on a pull request on allen-cell-animated/cell-catalog

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meganrm created a review comment on a pull request on allen-cell-animated/cell-catalog
did you start from this script? it has both allele_count and clone_number https://github.com/allen-cell-animated/cell-line-catalog/pull/197/files

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meganrm created a review on a pull request on allen-cell-animated/cell-catalog

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meganrm created a review comment on a pull request on allen-cell-animated/cell-catalog
they should definitely be kept we're using the thumbnail to render in the parental line modal

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meganrm created a review on a pull request on allen-cell-animated/cell-catalog

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meganrm created a review comment on a pull request on allen-cell-animated/cell-catalog
do you know why these are empty?

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meganrm created a review on a pull request on allen-cell-animated/cell-catalog

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meganrm created a review on a pull request on mesoscope/cellpack

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meganrm opened an issue on AllenInstitute/biofile-finder
Tooltip is misaligned
<img width="362" alt="Image" src="https://github.com/user-attachments/assets/24155a4c-8260-4fe3-8b2e-b8a9d6784b27" />
meganrm opened an issue on AllenInstitute/biofile-finder
Icons aren't loading
Both safari and chrome on a MacBook Pro: <img width="1434" alt="Image" src="https://github.com/user-attachments/assets/1d2b646c-3968-4233-b998-a859c2e5435f" /> <img width="571" alt="Image" src="...
meganrm pushed 1 commit to main allen-cell-animated/cell-catalog
  • Update Disease Cell Line “AICS-97/index” 78de231

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meganrm pushed 1 commit to main allen-cell-animated/cell-catalog
  • Update Disease Cell Line “AICS-97/index” c807323

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meganrm pushed 2 commits to feature/normal-cell-line-table allen-cell-animated/cell-catalog
  • add thumbnails next to main image (#78) * read thumbnails * remove hard coded width in image query * unpack an... fae9e6f
  • Merge branch 'main' of https://github.com/meganrm/cell-catalog-2.1 into feature/normal-cell-line-table f123282

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meganrm opened an issue on mesoscope/cellpack-client
deploy to github pages
## Use Case want to be able see the site online ## Acceptance Criteria a github action that you can trigger by creating a new release ## Details check simularium github actions for examples
meganrm created a comment on an issue on mesoscope/cellpack
this may be a few separate PRs/subtasks, but we should make sure the docs are up to date

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meganrm closed an issue on mesoscope/cellpack
Specify Output .simularium File Name
## Use Case Currently, the generated .simularium file is named based on a variety of parameters in the recipe and config files that are submitted for a cellpack packing. This means if we wanted to...
meganrm closed an issue on mesoscope/cellpack
API Gateway for Cellpack Server
## Use Case We want to be able to trigger any functionality the client would want to for the cellpack server via the API gateway. To start, we should have the following endpoints - POST /submit...
meganrm closed an issue on mesoscope/cellpack
Pass Recipe and Config into Docker Container
## Use Case * We need to be able to configure the Dockerfile to accept recipe and config parameters, and then pass those to the `pack` script as the `-r` and `-c` params * Also, when running in d...
meganrm created a comment on an issue on mesoscope/cellpack
[cellpack-client](https://github.com/mesoscope/cellpack-client) exists

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meganrm closed an issue on mesoscope/cellpack
Put cellPACK on a server
meganrm created a comment on an issue on mesoscope/cellpack
1. pack recipe 2. save result 3. load result as starting point + load recipe/config 4. pack again around the existing packed objects

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meganrm closed an issue on mesoscope/cellpack
Jitter packing results in overlaps for some parameter ranges
## Description Packing a recipe with the jitter algorithm results in overlaps as detected by the analysis workflow. These overlaps can be identified in the packing image. ![image](https://user-...
meganrm opened an issue on mesoscope/cellpack
Speed up packing
Jitter was really fast, but we discovered some issues with it allowing small overlaps (for some use cases it might be good enough). Our new system has zero overlaps, but is a lot slower. Are ther...
meganrm created a comment on an issue on mesoscope/cellpack
this needs more details: but there is a lot of code dealing with `ext` that labels things as part of this special external recipe. Would be good to dig into and see what code cleanup can be done

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meganrm edited a wiki page on mesoscope/cellpack
meganrm created a review on a pull request on allen-cell-animated/cell-catalog
I made a few changes directly, otherwise looks good

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meganrm pushed 2 commits to feature/thumbnails-next-to-main-image allen-cell-animated/cell-catalog
  • get rid of word placeholder 827352c
  • prevent images from growing and shrinking when selected 3905333

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meganrm created a review comment on a pull request on allen-cell-animated/cell-catalog
i was not aware of this (same with the table header) and the headers are used for consistent typography across the app. I would prefer to address this all at once than have some places the styling ...

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