Ecosyste.ms: Timeline
Browse the timeline of over 8.76 Billion events for every public repo on GitHub, all the way back to 2015. Data updated hourly from GH Archive.
eroell pushed 1 commit to feature/larger-than-memory-tutorial theislab/ehrapy-tutorials
- remove unused import 8f4bd38
eroell pushed 1 commit to feature/larger-than-memory-tutorial theislab/ehrapy-tutorials
- overhaul 1e78351
eroell pushed 1 commit to feature/larger-than-memory-tutorial theislab/ehrapy-tutorials
- update descr. code f48970e
eroell pushed 1 commit to feature/larger-than-memory-tutorial theislab/ehrapy-tutorials
- rename 2b26c24
eroell pushed 1 commit to feature/larger-than-memory-tutorial theislab/ehrapy-tutorials
- first commit ooc tutorial 358d561
Zethson created a review comment on a pull request on theislab/ehrapy-tutorials
<p>Not sure how helpful this comment is ^_^</p> <br/> _Reply via <a href='https://app.reviewnb.com/theislab/ehrapy-tutorials/pull/30/discussion/'>ReviewNB</a>_ <div id='ReviewNBCommentContext-DoN...
Zethson created a review comment on a pull request on theislab/ehrapy-tutorials
<pre class="ql-syntax" spellcheck="false">Line #1. # TODO: potentially add transformer to ep.pp.neighbors. for now: </pre><p>Yeah, let's consider that. </p> <br/> _Reply via <a href='https:/...
Zethson created a review comment on a pull request on theislab/ehrapy-tutorials
<p>Looks like the examples uses annoy, but since fknni is integrated into ehrapy, we could also use faiss?</p> <br/> _Reply via <a href='https://app.reviewnb.com/theislab/ehrapy-tutorials/pull/30...
Zethson created a review comment on a pull request on theislab/ehrapy-tutorials
<p>Funny that you think we need to explain PCA but not in detail what chunks do. I wager that our audience might've heard about PCA, but not chunks, cluster, and other technical terms.</p><p> </p> ...
Zethson created a review comment on a pull request on theislab/ehrapy-tutorials
<pre class="ql-syntax" spellcheck="false">Line #2. adata.layers["raw"] = adata.X.copy() # Making sure we keep access to the raw counts </pre><p>We don't have raw counts!</p> <br/> _Reply vi...
Zethson created a review comment on a pull request on theislab/ehrapy-tutorials
<p>This might be good enough. I don't have the impression though that this tutorial gets the point across that this scales with dataset size. Like we never show RAM usage or show that this works in...
Zethson created a review comment on a pull request on theislab/ehrapy-tutorials
<p>Not sure whether we need it but it doesn't hurt</p>
Zethson created a review comment on a pull request on theislab/ehrapy-tutorials
<p>Yeah it should be bigger. You might need to explain what the chunks are?</p>
eroell created a review comment on a pull request on theislab/ehrapy-tutorials
<p>Might show more functions, depending on which ones are available or can be made available for dask with minor adjustments.</p><p> </p><p> </p> <br/> _Reply via <a href='https://app.reviewnb.co...
eroell created a review comment on a pull request on theislab/ehrapy-tutorials
<p>Considering to write file to disk, and then read it from there, to have a "reading a file" case here</p><p> </p> <br/> _Reply via <a href='https://app.reviewnb.com/theislab/ehrapy-tutorials/pu...
eroell created a review comment on a pull request on theislab/ehrapy-tutorials
<p>Make bigger at the end, this is now somewhat scalable.</p><p> </p><p>I am looking into synthea dataset here <a href="https://synthea.mitre.org/downloads" target="_blank">https://synthea.mitre.or...
review-notebook-app[bot] created a comment on a pull request on theislab/ehrapy-tutorials
Check out this pull request on <a href="https://app.reviewnb.com/theislab/ehrapy-tutorials/pull/30"><img align="absmiddle" alt="ReviewNB" height="28" class="BotMessageButtonImage" src="https...
eroell opened a draft pull request on theislab/ehrapy-tutorials
first draft w/ open todos
First draft. Edited from https://github.com/scverse/scanpy-tutorials/blob/02c4946e0be47e033355ef84b2a4909b302d2513/dask.ipynb, all credits @ilan-gold. Adresses issue on ehrapy repo https://gi...
eroell created a branch on theislab/ehrapy-tutorials
feature/larger-than-memory-tutorial - Tutorials for ehrapy
Zethson pushed 2 commits to main theislab/ehrapy-tutorials
Zethson closed a pull request on theislab/ehrapy-tutorials
neighbours to neighbors
Hope that noone uses them with old ehrapy version?
review-notebook-app[bot] created a comment on a pull request on theislab/ehrapy-tutorials
Check out this pull request on <a href="https://app.reviewnb.com/theislab/ehrapy-tutorials/pull/29"><img align="absmiddle" alt="ReviewNB" height="28" class="BotMessageButtonImage" src="https...
eroell opened a pull request on theislab/ehrapy-tutorials
neighbours to neighbors
Hope that noone uses them with old ehrapy version?
eroell created a branch on theislab/ehrapy-tutorials
fix/fix/consistent-english - Tutorials for ehrapy