Ecosyste.ms: Timeline

Browse the timeline of events for every public repo on GitHub. Data updated hourly from GH Archive.

opensafely/metformin_covid

alainamstutz pushed 1 commit to diabetes-algo-split opensafely/metformin_covid

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alainamstutz pushed 1 commit to diabetes-algo-split opensafely/metformin_covid

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alainamstutz pushed 1 commit to diabetes-algo-split opensafely/metformin_covid

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alainamstutz pushed 1 commit to diabetes-algo-split opensafely/metformin_covid
  • Update data_process_dm_algo.R 23a5daa

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alainamstutz pushed 1 commit to diabetes-algo-split opensafely/metformin_covid

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alainamstutz pushed 1 commit to diabetes-algo-split opensafely/metformin_covid

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alainamstutz created a branch on opensafely/metformin_covid

diabetes-algo-split - Implications of metformin for (Long) COVID

alainamstutz pushed 1 commit to main opensafely/metformin_covid
  • Update data_process.R annotations 0a91959

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alainamstutz pushed 1 commit to main opensafely/metformin_covid
  • Update fn_elig_criteria_midpoint6.R annotations e8cc292

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alainamstutz pushed 1 commit to main opensafely/metformin_covid
  • Update metformin_covid.Rproj 210d551

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alainamstutz pushed 1 commit to main opensafely/metformin_covid
  • added more indicators to data_process and adapted dataset definition slightly - treatment strategies - starting wind... c81f30b

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alainamstutz pushed 1 commit to main opensafely/metformin_covid
  • Updated dataset definition - Added first/last to the clinical eligibility criteria - Added metformin monotherapy cod... 962cf47

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alainamstutz pushed 1 commit to main opensafely/metformin_covid
  • Update dataset_definition_landmark.py changed to new ehrQL function for APCS/HES table to search in all_diagnoses ac6b5cc

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alainamstutz pushed 1 commit to main opensafely/metformin_covid
  • Update fn_elig_criteria_midpoint6.R 426d817

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alainamstutz pushed 21 commits to main opensafely/metformin_covid
  • updated data_process and added quality assurance 29212ce
  • Merge branch 'main' into landmark-data-preparation 58876d7
  • Update dataset_definition_landmark.py Only 2 minor changes: - Sex (error in previous dataset definition) - annotatio... 4e6ad55
  • Update dataset_definition_landmark.py 941ce87
  • Coded/applied all quality assurance, completeness criteria and eligibility criteria 4a300f1
  • Update dataset_definition_landmark.py updated diabetes variables from _cov_ to _elig_ 1371f4a
  • R scripts for data preparation (formatting & apply eligibility) f3047c5
  • adapted project yaml to reflect output 72dac1e
  • Update data_process.R adapted meta-dates import fac6290
  • adaptations based on PMD's review e6e4cd2
  • Update data_process.R 4f6ae0e
  • Update data_process.R 0a3a412
  • slightly updated elig criteria and dataset definition d05ecea
  • Update dataset_definition_landmark.py 03f4a0f
  • Updated dataset definition: a) search gestational diabetes also in secondary care, b) search for last (not first) eli... f078c1c
  • Merge branch 'landmark-data-preparation' of https://github.com/opensafely/metformin_covid into landmark-data-preparation d4f3d71
  • updated data_process, fn_elig_criteria, and dataset_definition data_process: Added more exposure variables to assess... 04ccfc4
  • added all Long COVID signs and symptoms cdfdeef
  • add exp_bin_treat_nothing 7110ef2
  • Update fn_elig_criteria_midpoint6.R 4a68316
  • and 1 more ...

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alainamstutz deleted a branch opensafely/metformin_covid

landmark-data-preparation

alainamstutz closed a pull request on opensafely/metformin_covid
Landmark data preparation
Hi Venexia, I would love to have your review. It contains: data_process.R, which does the following: 1. Import/extract the feather dataset from the dataset definition that Zoe already reviewed a...
alainamstutz pushed 4 commits to landmark-data-preparation opensafely/metformin_covid
  • updated data_process, fn_elig_criteria, and dataset_definition data_process: Added more exposure variables to assess... 04ccfc4
  • added all Long COVID signs and symptoms cdfdeef
  • add exp_bin_treat_nothing 7110ef2
  • Update fn_elig_criteria_midpoint6.R 4a68316

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alainamstutz created a review on a pull request on opensafely/metformin_covid

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alainamstutz created a review comment on a pull request on opensafely/metformin_covid
I fully understand!

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alainamstutz created a review on a pull request on opensafely/metformin_covid

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pmadleydowd created a review comment on a pull request on opensafely/metformin_covid
Sorry I wont have time to review any more changes this week. Happy to do further review in Feb 2025 once back

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pmadleydowd created a review on a pull request on opensafely/metformin_covid

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alainamstutz created a review on a pull request on opensafely/metformin_covid

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alainamstutz created a review comment on a pull request on opensafely/metformin_covid
Hi Paul, based on discussions with Venexia and Rachel on Thursday, I added treatment patterns to the feasibility data output, since we are not sure what the best design is (this landmark design is ...

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alainamstutz created a review on a pull request on opensafely/metformin_covid

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alainamstutz created a review comment on a pull request on opensafely/metformin_covid
Re 1793: It is from the post covid diabetes repo. 1948 would not be a good idea, then we exclude 70+, so 1793 makes somehow sense (but not related to NHS establishment). I have not received an answ...

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alainamstutz created a review on a pull request on opensafely/metformin_covid

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pmadleydowd created a review comment on a pull request on opensafely/metformin_covid
matches protocol and implements single coding (double coding removed) minor comment: for clinical history variables do you need to consider if the exclusion criteria occurs on the same day that...

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pmadleydowd created a review on a pull request on opensafely/metformin_covid
few more checks needed before approval - have stated which files approved and which need more comments in the comments section of each file

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