lanl/NGEE-Arctic-E3SM Events in 2024 - Ecosyste.ms: Timeline

resolved: registry topodrag d56618a
resolved: gitignore f57b015
subglacial runoff for tracers, part 1 b4198e8
subglacial runoff for tracers, part 2 - registry 5cb8a57
subglacial runoff freezing temperature at landicepressure b8f6d4f
resolved: compsets tmix cf5c31a
typo 0fccd70
more compsets f820afb
typo: remainingFluxSubglacialRunoff 71dc2ee
updated sg units 2637229
change config_flux_attenuation_coefficient_subglacial_runoff default to 1 mm 98dc48b
add namelist option to include some parts of runoff only: config_use_SGR_opt 2396978
more basic compsets c52d123
forgotten bld 9b786dd
no sg in kpp option de04001
config_use_SGR_opt -1 correction 0ab2384
config read in forcing 81d9488
sgr_flux_vertical_location and SGR to sgr 4745779
more sgr testing options for TS separation e55b516
resolved: conservation check 9179ab0
and 102 more ...

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rfiorella pushed 96 commits to master lanl/NGEE-Arctic-E3SM

September 4, 2024 11:56pm

resolved: registry topodrag d56618a
resolved: gitignore f57b015
subglacial runoff for tracers, part 1 b4198e8
subglacial runoff for tracers, part 2 - registry 5cb8a57
subglacial runoff freezing temperature at landicepressure b8f6d4f
resolved: compsets tmix cf5c31a
typo 0fccd70
more compsets f820afb
typo: remainingFluxSubglacialRunoff 71dc2ee
updated sg units 2637229
change config_flux_attenuation_coefficient_subglacial_runoff default to 1 mm 98dc48b
add namelist option to include some parts of runoff only: config_use_SGR_opt 2396978
more basic compsets c52d123
forgotten bld 9b786dd
no sg in kpp option de04001
config_use_SGR_opt -1 correction 0ab2384
config read in forcing 81d9488
sgr_flux_vertical_location and SGR to sgr 4745779
more sgr testing options for TS separation e55b516
resolved: conservation check 9179ab0
and 76 more ...

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rfiorella pushed 108 commits to lanl/IM3 lanl/NGEE-Arctic-E3SM

September 4, 2024 11:53pm

resolved: registry topodrag d56618a
resolved: gitignore f57b015
subglacial runoff for tracers, part 1 b4198e8
subglacial runoff for tracers, part 2 - registry 5cb8a57
subglacial runoff freezing temperature at landicepressure b8f6d4f
resolved: compsets tmix cf5c31a
typo 0fccd70
more compsets f820afb
typo: remainingFluxSubglacialRunoff 71dc2ee
updated sg units 2637229
change config_flux_attenuation_coefficient_subglacial_runoff default to 1 mm 98dc48b
add namelist option to include some parts of runoff only: config_use_SGR_opt 2396978
more basic compsets c52d123
forgotten bld 9b786dd
no sg in kpp option de04001
config_use_SGR_opt -1 correction 0ab2384
config read in forcing 81d9488
sgr_flux_vertical_location and SGR to sgr 4745779
more sgr testing options for TS separation e55b516
resolved: conservation check 9179ab0
and 88 more ...

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rfiorella closed a pull request on lanl/NGEE-Arctic-E3SM

August 29, 2024 2:56am

Add CI test for IM-1-2-3 cases.

Will need to rebase and remove commit from feature branches before sending on to E3SM repository.

rfiorella pushed 1191 commits to lanl/IM2 lanl/NGEE-Arctic-E3SM

August 28, 2024 4:37am

implement PAM driver subcycling 63df74c
bug fix 7cc042a
bug fix in PAM variance transport f714cf4
update default MMF_PAM_dyn_per_phys 2513a72
update default PAM hyperdiffusion timescale 98a6e40
update PAM default crm_dx to 3km 2c54c4d
Merge 'origin/master' into whannah/mmf/pam-updates 1d24c4a
Fixes to get valgrind working on mappy 0da40f5
Remove icebergs in each RK stage Remove icebergs in each RK stage. When ice-shelves melt through in during an interm... 289951d
Generalize cice-qc scripts to work with E3SM-Polar-Developer.sh output 08b8fc5
remove comment in bin_to_cube 90d4e2d
Add TL319_r05_IcoswISC30E3r5 configuration ce8ef39
fix formulation of zonal mean terms for TEM output 434bd3c
Check relative lat/lon error scorpio reads in floating precision, yaml reads in double precision, so using == might ... ac6bcec
Sync IOP file pres field to host IOP file pressure field will have been updated on device before calculating the sur... 850ae9a
Use EKAT's new Pack::update() function d7f5bcb
Port iop_apply_coriolis 3ae438c
EAM: move apply_iop_coriolis() out of nelemd loop apply_iop_coriolis() contains a loop over elements, in the current... ca62824
Define lambda for updating homme states for IOP functions Porting domain relaxation will need this exact code, so co... c9d1775
Port domain relaxation 3f7eee0
and 1171 more ...

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rfiorella pushed 1216 commits to lanl/IM1 lanl/NGEE-Arctic-E3SM

August 28, 2024 4:33am

Adding support for PIO_REARR_ANY Adding support for new SCORPIO rearranger, PIO_REARR_ANY b65a190
Consolidate update() calls 9a41cce
reduce hd_timescale back to 60 sec fr PAM 748ad0a
update PAM submodule 6b92cab
Merge pull request #2783 from jayeshkrishna/jayeshkrishna/pio_rearr_any Adding support for PIO_REARR_ANY b91f74c
EAMxx: subfield of read-only fields must be read-only bcb6d28
Merge pull request #2790 from E3SM-Project/tcclevenger/dp/port_remaining_iop_functions Port remaining IOP functions ... b114592
make PAM dry density acceleration optional f750a1d
remove MMF_PAM_dyn_per_phys namelist option 8e65b05
fix white space 743b8ff
pam_debug.h clean-up 56c11f7
draft adding aodvis as a diag 1faf5f0
complete aodvis calc and testing b2cbf3b
move to swbnd 10 and fix tests on cuda c3ff700
relax tolerance to allow passing in sp 560ec85
deep copy to zero on host ffc0570
change name to AerosolOpticalDepth550nm ea1bfa8
use ekat view red, fix const 314e23c
use ekat view red, fix const 4c8fa5a
use ESU shortcut instead 12f931e
and 1196 more ...

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rfiorella pushed 1 commit to lanl/IM3 lanl/NGEE-Arctic-E3SM

August 28, 2024 12:18am

remove local ci test 22e1cc2

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rfiorella pushed 1200 commits to lanl/IM3 lanl/NGEE-Arctic-E3SM

August 27, 2024 3:08pm

Generalize cice-qc scripts to work with E3SM-Polar-Developer.sh output 08b8fc5
remove comment in bin_to_cube 90d4e2d
Add TL319_r05_IcoswISC30E3r5 configuration ce8ef39
fix formulation of zonal mean terms for TEM output 434bd3c
Check relative lat/lon error scorpio reads in floating precision, yaml reads in double precision, so using == might ... ac6bcec
Sync IOP file pres field to host IOP file pressure field will have been updated on device before calculating the sur... 850ae9a
Use EKAT's new Pack::update() function d7f5bcb
Port iop_apply_coriolis 3ae438c
EAM: move apply_iop_coriolis() out of nelemd loop apply_iop_coriolis() contains a loop over elements, in the current... ca62824
Define lambda for updating homme states for IOP functions Porting domain relaxation will need this exact code, so co... c9d1775
Port domain relaxation 3f7eee0
Merge Pull Request #2789 from E3SM-Project/scream/jgfouca/mappy_valg_fixes Automatically Merged using E3SM Pull Requ... 17db7f0
Change standalone test to CASS case - New test allows for reading multiple IOP time slices during simulation - New c... 0e04a50
Merge Pull Request #2788 from E3SM-Project/scream/jgfouca/update_ekat_2024_04_11 Automatically Merged using E3SM Pul... 6137460
Merge Pull Request #2754 from jayeshkrishna/scream/jayeshkrishna/diff_iotypes_for_hist_rest Automatically Merged usi... 982d8d1
Updating to SCORPIO 1.6.2 SCORPIO to 1.6.2 includes * Support for standalone EAMXX/SCREAM builds * A new rearranger... 56b187a
Adding support for PIO_REARR_ANY Adding support for new SCORPIO rearranger, PIO_REARR_ANY b65a190
Consolidate update() calls 9a41cce
reduce hd_timescale back to 60 sec fr PAM 748ad0a
update PAM submodule 6b92cab
and 1180 more ...

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rfiorella pushed 1190 commits to master lanl/NGEE-Arctic-E3SM

August 26, 2024 3:41pm

bug fix in PAM variance transport 2380d33
implement PAM driver subcycling 63df74c
bug fix 7cc042a
bug fix in PAM variance transport f714cf4
update default MMF_PAM_dyn_per_phys 2513a72
update default PAM hyperdiffusion timescale 98a6e40
update PAM default crm_dx to 3km 2c54c4d
Merge 'origin/master' into whannah/mmf/pam-updates 1d24c4a
Fixes to get valgrind working on mappy 0da40f5
Remove icebergs in each RK stage Remove icebergs in each RK stage. When ice-shelves melt through in during an interm... 289951d
Generalize cice-qc scripts to work with E3SM-Polar-Developer.sh output 08b8fc5
remove comment in bin_to_cube 90d4e2d
Add TL319_r05_IcoswISC30E3r5 configuration ce8ef39
fix formulation of zonal mean terms for TEM output 434bd3c
Check relative lat/lon error scorpio reads in floating precision, yaml reads in double precision, so using == might ... ac6bcec
Sync IOP file pres field to host IOP file pressure field will have been updated on device before calculating the sur... 850ae9a
Use EKAT's new Pack::update() function d7f5bcb
Port iop_apply_coriolis 3ae438c
EAM: move apply_iop_coriolis() out of nelemd loop apply_iop_coriolis() contains a loop over elements, in the current... ca62824
Define lambda for updating homme states for IOP functions Porting domain relaxation will need this exact code, so co... c9d1775
and 1170 more ...

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rfiorella pushed 1 commit to lanl/IM3 lanl/NGEE-Arctic-E3SM

August 23, 2024 4:00am

Fix new IM3 paramter values in pftvarcon fixes an issue where using less than the maximum pfts set new parameters wi... 2dc7b12

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rfiorella pushed 1 commit to lanl/IM3 lanl/NGEE-Arctic-E3SM

August 23, 2024 1:02am

Add IM3 ERS developer test to e3sm_land_developer Adds a new exact restart test that uses new parameters in the para... a017edf

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rfiorella pushed 1 commit to lanl/IM3 lanl/NGEE-Arctic-E3SM

August 22, 2024 3:40pm

Rearrange taper assignment in pftvarcon The taper array was being initialized incorrectly, leading to developer test... 85e8a36

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katrinaebennett created a branch on lanl/NGEE-Arctic-E3SM

August 21, 2024 4:20pm

kbennett/IM3 - Energy Exascale Earth System Model source code.

rfiorella pushed 1 commit to lanl/IM1 lanl/NGEE-Arctic-E3SM

August 15, 2024 7:54pm

IWP runoff and subsidence bug fixes Fixes a number of bugs that were discovered during an IM1 code review: 1. subsid... af5debb

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rfiorella pushed 1 commit to lanl/IM1 lanl/NGEE-Arctic-E3SM

August 14, 2024 2:35pm

Move column microtopo to col_ws from col_pp Moves a bunch of the microtopograhic parameters from col_pp to col_ws, a... 73a2f17

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rfiorella pushed 1 commit to lanl/IM1 lanl/NGEE-Arctic-E3SM

August 12, 2024 9:28pm

Move column microtopo to col_ws from col_pp Moves a bunch of the microtopograhic parameters from col_pp to col_ws, a... 5945526

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rfiorella pushed 24 commits to lanl/IM1 lanl/NGEE-Arctic-E3SM

August 12, 2024 6:48pm

Add maxalt across overall simulation. Adds another variable of maxalt_ever and its index following existing logic fo... 499b8f3
Add excess ground ice as a column variable Adds excess ground ice to the col_ws / column water state data structure ... cb0c6ce
Change excess ground ice units to unitless Excess ground ice had been templated in these changes as mass/area - chan... 9cbbe07
Update excess_ice from single column value to depth varying Changes dimension on excess_ice parameter in water state... e6ee20f
defined new ice wedge polygon land unit types and microtopographic parameters 4b3eded
Added routine to calculate surface inundated fraction in polygonal tundra, but still needs work defining values for m... ffc61e1
Remove ispolygon from landunit_varcon import ispolygon is part of lun_pp data structure and not landunit_varcon so d... bb94c15
New routine to calculate surface runoff in polygonal tundra and some small fixes elsewhere b8a32cc
add meangradz to lun_pp wip - subsidence calculations in polygonal tundra Adds infrastructure for calculating subsi... bea59d6
Add ground subsidence variable to SoilHydrologyMod Imports the iwp_subsidence variable from col_pp into the SoilHydr... 921acdc
Add variable calculation of microtopographic parameters Adds linear scaling of various microtopographic parameters i... 9813963
Track MAXALT in 1989 Adds tracking for maxalt (really thaw depth) in 1989 for comparision with ATS. Necessary for mo... b9397b7
Add use_polygonal_tundra flag to CanopyStateType Adds use_polygonal_tundra flag to CanopyStateType as new variables ... 23cbba7
Add missing polygon types to SoilHydrologyMod Not all polygon types were being imported from landunit_varcon, commit... 703b8a5
Add missing allocation of wt_polygon matrix wt_polygon had never been allocated in elm_initializeMod, so needs to be... fcc31ec
Remove melted excess ice and set initiation for subsidence Removes melted excess ice from the profile and also set t... 8f38900
Read gradz from surfdata file when polygonal tundra is turned on. Adds logic to read gradz from surfdata file when N... aab2d89
Prevent errors in wt_polygon calculations Calculation of wt_polygon fails when use_polygonal_tundra = .false., adds ... 3d19d3c
Ensure EXCESS_ICE only hist/rest files if use_polygonal_tundra Some developer tests were reporting DIFF due to addit... 568d148
Add calls to add columns/patches/landunits for polygonal tundra Previous logic hadn't been adding patches/columns/ a... 8d77463
and 4 more ...

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rfiorella pushed 1 commit to lanl/IM2 lanl/NGEE-Arctic-E3SM

August 6, 2024 7:27pm

Add Arctic initialization option Adds an Arctic initialization option that starts with a fully saturated column and ... 8c8c5e3

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rfiorella deleted a branch lanl/NGEE-Arctic-E3SM

August 6, 2024 2:30am

im1-test

rfiorella created a branch on lanl/NGEE-Arctic-E3SM

August 6, 2024 2:29am

im1-test - Energy Exascale Earth System Model source code.

rfiorella deleted a branch lanl/NGEE-Arctic-E3SM

August 6, 2024 1:21am

rfiorella/IM3-shrub-bending