Ecosyste.ms: Timeline
Browse the timeline of events for every public repo on GitHub. Data updated hourly from GH Archive.
hexylena opened an issue on galaxyproject/galaxy
I want to copy+paste an element identifier into my email
In older galaxies I could copy and paste an element identifier. Now that every dataset is draggable wherever it is shown, I cannot. I'm not sure what the solution is here, a dropdown option to '...
hexylena opened an issue on galaxyproject/galaxy
searching in workflow editor does not find your workflows as possible results
**Describe the bug** I searched for a term used in my workflows and found nothing. **Galaxy Version and/or server at which you observed the bug** Galaxy Version: 24.1.3.dev0 Commit: https...
hexylena created a comment on an issue on galaxyproject/galaxy
Since I got the github notification from Helge, I'll add that I just received a query from a colleague as to why she was getting an error message for sift.xml, which, apparently is quite broken htt...
hexylena created a comment on an issue on galaxyproject/galaxy
Good thought @mvdbeek. ``` galaxy=# show timezone; TimeZone ---------- Etc/UTC (1 row) ```
hechth created a comment on a pull request on galaxyproject/galaxy
@subindev-d this looks very cool, which file types are you supporting? Also, let me know if you are interested in Mol*.
hechth created a comment on an issue on galaxyproject/galaxy
@mvdbeek @abretaud @yguitton can this be closed?
mvdbeek created a review comment on a pull request on galaxyproject/galaxy
I think this is resolved by making the public/private distinction explicit ? I'm catching `ItemMustBeClaimed` here now.
mvdbeek created a review comment on a pull request on galaxyproject/galaxy
Alright, both is possible now depending on the value of the `public` query parameter. If not provided we try to claim the request.
jmchilton created a review comment on a pull request on galaxyproject/galaxy
I don't know but the code sharing in this file is very problematic all over.
jmchilton created a review comment on a pull request on galaxyproject/galaxy
It was present in the existing validation code. I guess the idea is to not load the tool if that file is not available.
galaxybot opened a pull request on galaxyproject/galaxy
Update Python dependencies
by running `make update-dependencies`.
bgruening created a review comment on a pull request on galaxyproject/galaxy
```suggestion <param name="parameter" type="drill_down" dynamic_options="collate_table(ref_parameter.dataset.get_file_name())"> ``` How could this pass tests?
bgruening created a review comment on a pull request on galaxyproject/galaxy
Is that really needed here as assert?
bgruening created a review comment on a pull request on galaxyproject/galaxy
can you add a comment what you are trying here?
jmchilton opened a draft pull request on galaxyproject/galaxy
Better logging around tool loading
Reduce logging around certain classes of known tool loading "issues". The whole big stack trace corresponding to known configuration options acting the correct way is kind of annoying. Swapping fro...
hexylena created a comment on an issue on galaxyproject/galaxy
> So while this may be helpful immediately, it would break down once you start renaming things. But, I control the names of the collections being input, so, I don't understand how that's an issu...
wm75 created a comment on an issue on galaxyproject/galaxy
Hmm, as always, part of the answer is names of datasets and collections in the history aren't fixed, but element identifiers are. So while this may be helpful immediately, it would break down once ...
natefoo opened an issue on galaxyproject/galaxy
Double slash in `//root/display_as` UCSC link causes a 404
**Describe the bug** The dataset link generated for the UCSC display application is: ``` https://test.galaxyproject.org//root/display_as?id=2341760&display_app=ucsc&authz_method=display_at ``...
jmchilton created a comment on a pull request on galaxyproject/galaxy
I don't use Galaxy or follow the latest trends in tool design - so feel free to just dismiss this suggestion if it doesn't reflect how tools are actually used. My gut is though I would implement th...